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1

Model Channel Ion Currents in NaCl-Extended Simple Point Charge Water Solution with Applied-Field Molecular Dynamics

Crozier, Paul S., Henderson, Douglas, Rowley, Richard L., Busath, David D.

Journal:

Biophysical Journal

Year:

2001

Language:

english

File:

PDF, 614 KB

english, 2001

2

Structural and Functional Studies of M2 Proton Channel From Influenza A Virus

Sharma, Mukesh, Yi, Myunggi, Peterson, Emily, Inouye, Daniel, Velez, Azlyn, Can, Thach, Qin, Huajun, Busath, David D., Zhou, Huan-Xiang, Cross, Timothy A.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 58 KB

english, 2010

3

Divalent copper complexes as influenza A M2 inhibitors

Gordon, Nathan A., McGuire, Kelly L., Wallentine, Spencer K., Mohl, Gregory A., Lynch, Jonathan D., Harrison, Roger G., Busath, David D.

Journal:

Antiviral Research

Year:

2017

Language:

english

File:

PDF, 588 KB

english, 2017

4

Molecular dynamics simulations of Trp side-chain conformational flexibility in the gramicidin A channel

Nathan C. Bingham, Natasha E. C. Smith, Timothy A. Cross, David D. Busath

Journal:

Year:

2003

Language:

english

File:

PDF, 338 KB

english, 2003

5

An Inverting Basket Model for AE1 Transport

VIVEK RAMAKRISHNAN, DAVID D. BUSATH

Journal:

Journal of Theoretical Biology

Year:

2002

Language:

english

File:

PDF, 439 KB

english, 2002

6

Fluids near surfaces and in pores and membrane channels

Douglas Henderson, David D. Busath, Richard Rowley

Journal:

Progress in Surface Science

Year:

2001

Language:

english

File:

PDF, 677 KB

english, 2001

7

Simulation of the selectivity of a calcium channel

Dezso Boda, David D Busath, Douglas Henderson

Journal:

Applied Surface Science

Year:

2002

Language:

english

File:

PDF, 79 KB

english, 2002

8

Spectroscopic analysis of low pH and lipid-induced structural changes in type A botulinum neurotoxin relevant to membrane channel formation and translocation

Fen-Ni Fu, David D Busath, Bal Ram Singh

Journal:

Biophysical Chemistry

Year:

2002

Language:

english

File:

PDF, 223 KB

english, 2002

9

Free-energy profiles for ions in the influenza M2-TMD channel

Morad Mustafa, Douglas J. Henderson, David D. Busath

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2009

Language:

english

File:

PDF, 483 KB

english, 2009

10

Capture, transport, and maintenance of live squid (Loligo pealei) for electrophysiological studies

Lee D. Chabala, Robert S. Morello, David Busath, Miklos Danko, Catherine J. Smith-Maxwell, Ted Begenisich

Journal:

Pflügers Archiv European Journal of Physiology

Year:

1986

Language:

english

File:

PDF, 596 KB

english, 1986

11

Influence of pKaShifts on the Calculated Dipole Moments of Proteins

Brett L. Mellor, Shiul Khadka, David D. Busath, Brian A. Mazzeo

Journal:

The Protein Journal

Year:

2011

Language:

english

File:

PDF, 1.99 MB

english, 2011

12

The gramicidin channel ion permeation free-energy profile: Direct and indirect effects of CHARMM force field improvements

Morad Mustafa, David D. Busath

Journal:

Interdisciplinary Sciences: Computational Life Sciences

Year:

2009

Language:

english

File:

PDF, 695 KB

english, 2009

13

Gramicidin forms multi-state rectifying channels

Busath, David, Szabo, Gabor

Journal:

Year:

1981

File:

PDF, 327 KB

1981

14

Computer Simulation Studies of the Selectivity and Conductance of A Model Calcium Channel

Yan Yang, Dezsö Boda, Douglas Henderson, David Busath

Journal:

Journal of Computational Electronics

Year:

2002

Language:

english

File:

PDF, 60 KB

english, 2002

15

Photolysis of gramicidin A channels in lipid bilayers

David Don Busath, R.C. Waldbillig

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

1983

Language:

english

File:

PDF, 863 KB

english, 1983

16

Tryptophan photolysis is responsible for gramicidin-channel inactivation by ultraviolet light

Dan Jones, Elie Hayon, David Busath

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

1986

Language:

english

File:

PDF, 342 KB

english, 1986

17

Ultraviolet flash photolysis of gramicidin-doped lipid bilayers

David D. Busath, Elie Hayon

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

1988

Language:

english

File:

PDF, 382 KB

english, 1988

18

Synthesis and channel properties of [Tau16]gramicidin A

Roger W. Roeske, Tanya P. Hrinyo-Pavlina, Richard S. Pottorf, Terry Bridal, Xian-Zheng Jin, David Busath

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

1989

Language:

english

File:

PDF, 420 KB

english, 1989

19

Inhibition of gramicidin channel activity by local anesthetics

Terry R. Bridal, David Busath

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

1992

Language:

english

File:

PDF, 512 KB

english, 1992

20

Applied field nonequilibrium molecular dynamics simulations of ion exit from a β-barrel model of the L-type calcium channel

Vivek Ramakrishnan, Douglas Henderson, David D Busath

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2004

Language:

english

File:

PDF, 478 KB

english, 2004

21

Computational studies of gramicidin permeation: An entryway sulfonate enhances cation occupancy at entry sites

Morad Mustafa, Douglas J. Henderson, David D. Busath

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2009

Language:

english

File:

PDF, 1.11 MB

english, 2009

22

Drug sensitivity, drug-resistant mutations, and structures of three conductance domains of viral porins

Mukesh Sharma, Conggang Li, David D. Busath, Huan-Xiang Zhou, Timothy A. Cross

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2011

Language:

english

File:

PDF, 1.12 MB

english, 2011

23

Functional reconstitution of influenza A M2(22–62)

Emily Peterson, Ted Ryser, Spencer Funk, Daniel Inouye, Mukesh Sharma, Huajun Qin, Timothy A. Cross, David D. Busath

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2011

Language:

english

File:

PDF, 1.50 MB

english, 2011

24

Comparison of gramicidin A and gramicidin M channel conductance dispersities

Jeffrey C Markham, Joseph A Gowen, Timothy A Cross, David D Busath

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2001

Language:

english

File:

PDF, 218 KB

english, 2001

25

M2 protein from Influenza A: from multiple structures to biophysical and functional insights

Timothy A Cross, Hao Dong, Mukesh Sharma, David D Busath, Huan-Xiang Zhou

Journal:

Current Opinion in Virology

Year:

2012

Language:

english

File:

PDF, 611 KB

english, 2012

26

Noncontact Dipole Effects on Channel Permeation. IV. Kinetic Model of 5F-Trp13 Gramicidin A Currents

Thompson, Nephi, Thompson, Gina, Cole, Chad D., Cotten, Myriam, Cross, Timothy A., Busath, David D.

Journal:

Biophysical Journal

Year:

2001

Language:

english

File:

PDF, 225 KB

english, 2001

27

Noncontact Dipole Effects on Channel Permeation. V. Computed Potentials for Fluorinated Gramicidin

Anderson, Dean G., Shirts, Randall B., Cross, Timothy A., Busath, David D.

Journal:

Biophysical Journal

Year:

2001

Language:

english

File:

PDF, 239 KB

english, 2001

28

Noncontact Dipole Effects on Channel Permeation. VI. 5F- and 6F-Trp Gramicidin Channel Currents

Cole, Chad D., Frost, Adam S., Thompson, Nephi, Cotten, Myriam, Cross, Timothy A., Busath, David D.

Journal:

Biophysical Journal

Year:

2002

Language:

english

File:

PDF, 772 KB

english, 2002

29

The Role of Trp Side Chains in Tuning Single Proton Conduction through Gramicidin Channels

Gowen, Joseph A., Markham, Jeffrey C., Morrison, Sara E., Cross, Timothy A., Busath, David D., Mapes, Eric J., Schumaker, Mark F.

Journal:

Biophysical Journal

Year:

2002

Language:

english

File:

PDF, 417 KB

english, 2002

30

Atypical Gramicidin A Channels Appear to Have Increased Field Strength at One Binding Site

Busath, David, Szabo, Gabor

Journal:

Biophysical Journal

Year:

1984

Language:

english

File:

PDF, 291 KB

english, 1984

31

Gramicidin Channels Are Internally Gated

Jones, Tyson L., Fu, Riqiang, Nielson, Frederick, Cross, Timothy A., Busath, David D.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 435 KB

english, 2010

32

Structure-Activity Relationships of Influenza a M2 Inhibitors

Kearnes, Steven M., Herron, Steven, Busath, David D.

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 60 KB

english, 2011

33

Acid Sensitivity and Amanatadine Block of Influenza a M2 Channels in Folded Bilayers

Vijayvergiya, Viksita, Robertson, Matthew, Sharma, Mukesh, Cross, Timothy A., Busath, David D.

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 72 KB

english, 2011

34

Modeling the Membrane Environment for Membrane Proteins

Separovic, Frances, Killian, J. Antoinette, Cotten, Myriam, Busath, David D., Cross, Timothy A.

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 50 KB

english, 2011

35

From molecular dynamics to fluorescence anisotropy of fluorophores bound to oriented structures

Brian A. Mazzeo, David D. Busath

Journal:

Journal of Computational Physics

Year:

2013

Language:

english

File:

PDF, 1.16 MB

english, 2013

36

Noncontact Dipole Effects on Channel Permeation. I. Experiments with (5F-Indole)Trp13 Gramicidin A Channels

Busath, David D., Thulin, Craig D., Hendershot, Richard W., Phillips, L. Revell, Maughan, Peter, Cole, Chad D., Bingham, Nathan C., Morrison, Sara, Baird, Lissa C., Hendershot, Reed J., Cotten, Myriam

Journal:

Biophysical Journal

Year:

1998

Language:

english

File:

PDF, 206 KB

english, 1998

37

Noncontact Dipole Effects on Channel Permeation. III. Anomalous Proton Conductance Effects in Gramicidin

Revell Phillips, L., Cole, Chad D., Hendershot, Reed J., Cotten, Myriam, Cross, Timothy A., Busath, David D.

Journal:

Biophysical Journal

Year:

1999

Language:

english

File:

PDF, 142 KB

english, 1999

38

Noncontact Dipole Effects on Channel Permeation. II. Trp Conformations and Dipole Potentials in Gramicidin A

Dorigo, Andrea E., Anderson, Dean G., Busath, David D.

Journal:

Biophysical Journal

Year:

1999

Language:

english

File:

PDF, 156 KB

english, 1999

39

Fluorescence anisotropy of diphenylhexatriene and its cationic Trimethylamino derivative in liquid dipalmitoylphosphatidylcholine liposomes: Opposing responses to isoflurane

Nelson, Steven C., Neeley, Steven K., Melonakos, Eric D., Bell, John D., Busath, David D.

Journal:

Year:

2012

Language:

english

File:

PDF, 904 KB

english, 2012

40

Proton Conductance of Influenza Virus M2 Protein in Planar Lipid Bilayers

Vijayvergiya, Viksita, Wilson, Ryan, Chorak, Adam, Gao, Philip Fei, Cross, Timothy A., Busath, David D.

Journal:

Biophysical Journal

Year:

2004

Language:

english

File:

PDF, 149 KB

english, 2004

41

Tryptophan Contributions to the Empirical Free-Energy Profile in Gramicidin A/M Heterodimer Channels

Durrant, Jacob Devin, Caywood, Devin, Busath, David D.

Journal:

Biophysical Journal

Year:

2006

Language:

english

File:

PDF, 782 KB

english, 2006

42

Proton Transport through Influenza A Virus M2 Protein Reconstituted in Vesicles

Moffat, J. Craig, Vijayvergiya, Viksita, Gao, Philip F., Cross, Timothy A., Woodbury, Dixon J., Busath, David D.

Journal:

Biophysical Journal

Year:

2008

Language:

english

File:

PDF, 432 KB

english, 2008

43

AFM Visualization of Mobile Influenza A M2 Molecules in Planar Bilayers

Hughes, Travis, Strongin, Bradley, Gao, Fei Philip, Vijayvergiya, Viksita, Busath, David D., Davis, Robert C.

Journal:

Biophysical Journal

Year:

2004

Language:

english

File:

PDF, 838 KB

english, 2004

44

Endosis and Exosis: New Names for Fusion and Budding

David D. Busath, Dixon J. Woodbury, Adam Frost

Journal:

Journal of Membrane Biology

Year:

2012

Language:

english

File:

PDF, 133 KB

english, 2012

45

Structural and Functional Studies of M2 Proton Channel from Influenza A Virus

Sharma, Mukesh, Qin, Huajun, Peterson, Emily, Larson, Chris, Caywood, Weston, Rawlings, Rustin, Busath, David, Cross, Timothy A.

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 41 KB

english, 2009

46

Structural Insights for the Full Length Influenza A M2 Proton Channel in Native E. Coli Membranes

Qin, Huajun, Miao, Yimin, Fu, Riqiang, Sharma, Mukesh, Can, Thach, Busath, David D., Zhou, Huan-Xiang, Cross, Timothy A.

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 44 KB

english, 2012

47

Solid-State NMR Study on the Conductance Mechanism and Acid Activation of M2 Proton Channel

Can, Thach, Miao, Yimin, Sharma, Mukesh, Luca, Sorin, Qin, Huajun, Hung, Ivan, Truong, Milton, Busath, David, Zhou, Huan-Xiang, Cross, Timothy

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 46 KB

english, 2011

48

Acid-Activation, Proton Transport Rate Saturation, and pH-Dependence of Amantadine Block for Influenza a M2 Protein Truncate (22-62)

Peterson, Emily, Yi, Myunggi, Zhou, Huan-Xiang, Sharma, Mukesh, Cross, Timothy A., Busath, David

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 41 KB

english, 2010

49

Packing of Amantadine-Like Compounds in the Central Cavity of Influenza a M2

Evans, Curtis B., Busath, David

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 41 KB

english, 2012

50

Amantadine Analogs that Inhibit Mdck Cell Infection by Influenza a with M2(S31N)

Kolocouris, Antonios, Johnson, Brent, Tzitzoglaki, Christina, Gay, Nathan C., Busath, David D.

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 39 KB

english, 2013

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